Kim Sneppen

Kim Sneppen

Professor

ORCID: 0000-0001-9820-3567

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  1. Published

    A Mathematical Model for Transcriptional Interfernce by RNA Polymerase Traffic in Escherichia coli

    Sneppen, Kim, Dodd, J., Shearwin, K., Palmer, A., Schubert, R., Callen, B. & Egan, B., 2005, In: Journal of Molecular Biology. 346, 2, p. 399-409

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. Published

    A communication perspective on network topologies

    Sneppen, Kim & Rosvall, M., 2006, In: Progress of Theoretical Physics. Supplement. p. 103-118

    Research output: Contribution to journal › Conference article › Research › peer-review

  3. Published

    A cross-immunization model for the extinction of old influenza strains

    Uekermann, F. & Sneppen, Kim, 2016, In: Scientific Reports. 6, 8 p., 25907.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    A growing microcolony can survive and support persistent propagation of virulent phages

    Eriksen, R. S., Svenningsen, Sine Lo, Sneppen, Kim & Mitarai, Namiko, 1 Jan 2018, In: Proceedings of the National Academy of Sciences USA (PNAS). 115, 2, p. 337-342

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    A minimal model for multiple epidemics and immunity spreading

    Sneppen, Kim, Trusina, Ala, Jensen, Mogens Høgh & Bornholdt, S., 18 Oct 2010, In: PLoS ONE. 5, 10, p. e13326

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    A simple histone code opens many paths to epigenetics

    Sneppen, Kim & Dodd, I. B., 2012, In: P L o S Computational Biology. 8, 8, 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    A simple model for self organization of bipartite networks

    Sneppen, Kim, Rosvall, M., Trusina, A. & Minnhagen, P., 2004, In: EPL. 67, 3, p. 349-354

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Airborne Pathogens in a Heterogeneous World: Superspreading & Mitigation

    Kirkegaard, Julius Bier, Mathiesen, Joachim & Sneppen, Kim, 27 Oct 2020, In: medRxiv : the preprint server for health sciences. 9 p.

    Research output: Contribution to journal › Journal article › Research

  9. Published

    Applying allometric scaling to predator-prey systems

    Eilersen, Andreas Thomas & Sneppen, Kim, 8 Feb 2019, In: Physical Review E. 99, 2, 8 p., 022405.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Axelrod model: accepting or discussing

    Dybiec, B. M., Mitarai, Namiko & Sneppen, Kim, 1 Oct 2012, In: European Physical Journal B. Condensed Matter and Complex Systems. 85, 10, p. 357

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Barriers and Silencers: A Theoretical Toolkit for Control and Containment of Nucleosome-Based Epigenetic States

    Dodd, I. B. & Sneppen, Kim, 9 Dec 2011, In: Journal of Molecular Biology. 414, 4, p. 624-637

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    COVID-19 superspreading suggests mitigation by social network modulation

    Nielsen, Bjarke Frost, Simonsen, L. & Sneppen, Kim, 15 Mar 2021, In: Physical Review Letters. 126, 6 p., 118301.

    Research output: Contribution to journal › Letter › Research › peer-review

  13. Published

    Chaos in disease outbreaks among prey

    Eilersen, Andreas Thomas, Jensen, Mogens Høgh & Sneppen, Kim, 3 Mar 2020, In: Scientific Reports. 10, 7 p., 3907.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Clonal selection prevents tragedy of the commons when neighbors compete in a rock-paper-scissors game

    Juul, J. S., Sneppen, Kim & Mathiesen, Joachim, 26 Jun 2012, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 85, 6, p. 061924 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Coexistence of phage and bacteria on the boundary of self-organized refuges

    Heilmann, Silja, Sneppen, Kim & Krishna, S., 31 Jul 2012, In: Proceedings of the National Academy of Science of the United States of America. 109, 31, p. 12828-12833

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Coexistence of phage and bacteria on the boundary of self-organized refuges

    Heilmann, Silja, Sneppen, Kim & Krishna, S., 31 Jul 2012, In: Proceedings of the National Academy of Sciences of the United States of America. 109, 31, p. 12828-33 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Collaboration between CpG sites is needed for stable somatic inheritance of DNA methylation states

    Härter, Jan Olaf Mirko, Lövkvist, Cecilia, Dodd, I. B. & Sneppen, Kim, 1 Feb 2014, In: Nucleic Acids Research. 42, 4, p. 2235-2244

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Combinatorics of feedback in cellular uptake and metabolism of small molecules

    Krishna, S., Semsey, S. & Sneppen, Kim, 2007, In: Proceedings of the National Academy of Science of the United States of America. 52, p. 20815-20819

    Research output: Contribution to journal › Conference article › Research › peer-review

  19. Combinatorics of feedback in cellular uptake and metabolism of small molecules

    Krishna, S., Semsey, S. & Sneppen, Kim, 26 Dec 2007, In: Proceedings of the National Academy of Sciences of the United States of America. 104, 52, p. 20815-9 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Communication boundaries in networks

    Sneppen, Kim, Rosvall, M. & Trussina, A., 2005, In: Physical Review Letters. 94, 23, p. 238701

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Competition between diffusion and fragmentation: an important evolutionary process of nature

    Borg, J., Jensen, Mogens Høgh, Mathiesen, J. K., Olesen, Poul & Sneppen, Kim, 2003, In: Physical Review Letters. 91, p. 266103

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Computational architecture of the yeast regulatory network: Workshop on Flexibility in Biomolecules, MAY 15-18, 2005 Tempe, AZ

    Maslov, S. & Sneppen, Kim, 2005, In: Physical Biology. 2, 4, Sp. iss. Sl, p. S94-S100

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Conditional Cooperativity in Toxin-Antitoxin Regulation Prevents Random Toxin Activation and Promotes Fast Translational Recovery

    Cataudella, I., Trusina, Ala, Sneppen, Kim, Gerdes, K. & Mitarai, Namiko, 11 Apr 2012, In: Nucleic Acids Research. 40, 14, p. 6424-6434

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Conditional Cooperativity of Toxin - Antitoxin Regulation Can Mediate Bistability between Growth and Dormancy

    Cataudella, I., Sneppen, Kim, Gerdes, K. & Mitarai, Namiko, 1 Aug 2013, In: PLoS Computational Biology. 9, 8, e1003174.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Cooperative stabilization of the SIR complex provides robust epigenetic memory in a model of SIR silencing in Saccharomyces cerevisiae

    Sneppen, Kim & Dodd, I. B., 1 Apr 2015, In: Epigenetics. 10, 4, p. 293-302

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Cooperativity in a trading model with memory and production

    Donangelo, R. & Sneppen, Kim, 2002, In: Physica A: Statistical Mechanics and its Applications. 316, 1-4, p. 581-591

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Correction to; Why Do Phage Play Dice? (vol 83, pg 11416, 2009)

    Avlund, M., Dodd, I. B., Semsey, S., Sneppen, Kim & Krishna, S., 1 Mar 2012, In: Journal of Virology. 86, 5, p. 22898-2898 1 p.

    Research output: Contribution to journal › Comment/debate › Research › peer-review

  28. Published

    Cost-benefit of limited isolation and testing in COVID-19 mitigation

    Eilersen, Andreas Thomas & Sneppen, Kim, 29 Oct 2020, In: Scientific Reports. 10, 1, 7 p., 18543.

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Published

    DNA methylation in human epigenomes depends on local topology of CpG sites

    Lövkvist, Cecilia, Dodd, I. B., Sneppen, Kim & Härter, Jan Olaf Mirko, 20 Jun 2016, In: Nucleic Acids Research. 44, 11, p. 5123-5132

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    DNA supercoiling enhances cooperativity and efficiency of an epigenetic switch

    Norregaard, K., Andersson, M., Sneppen, Kim, Nielsen, Peter E., Brown, Stanley & Oddershede, L. B., 22 Oct 2013, In: Proceedings of the National Academy of Sciences USA (PNAS). 110, 43, p. 17386-91 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Danske Universiteter 2020: Hvidbog til Forskningspolitisk årsmøde 2012, Det Kongelige Danske Videnskabernes Selskab

    Bache, C., Christiansen, F. B., Løkke, Anne, Smith, N. & Sneppen, Kim, 2012, Det Kongelige Danske Videnskabernes Selskab. 50 p.

    Research output: Book/Report › Report › Commissioned

  32. Published

    Deconstructing the principles of ductal network formation in the pancreas

    Dahl-Jensen, Svend Bertel, Yennek, S., Flasse, L., Larsen, Hjalte List, Sever, D., Karremore, G., Novak, Ivana, Sneppen, Kim & Botton, A., 2018, In: PLOS Biology. 16, 7, 25 p., e2002842.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Degree landscapes in scale-free networks

    Axelsen, J. B., Bernhardsson, S., Rosvall, M., Sneppen, Kim & Trusina, Ala, Sep 2006, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 74, 3

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Detection in complex networks: correlation profile of the internet

    Sneppen, Kim, Maslov, S. & Zalizynak, A., 2004, In: Physica A: Statistical Mechanics and its Applications. 333, p. 529-540

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Differences in social activity increase efficiency of contact tracing

    Nielsen, Bjarke Frost, Sneppen, Kim, Simonsen, L. & Mathiesen, Joachim, 2 Oct 2021, In: European Physical Journal B. 94, 10, 11 p., 209.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Differentiation of developing olfactory neurons analysed in terms of coupled epigenetic landscapes

    Alsing, A. & Sneppen, Kim, 1 May 2013, In: Nucleic Acids Research. 41, 9, 4755-4764.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Diffusion on complex networks: a way to probe their large-scale topological structures

    Sneppen, Kim, Simonsen, I. & Eriksen, K., 2004, In: Physica A: Statistical Mechanics and its Applications. 336, p. 163-173

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Diffusion retardation by binding of tobramycin in an alginate biofilm model

    Cao, B., Christophersen, L., Kolpen, Mette, Jensen, Peter Østrup, Sneppen, Kim, Høiby, Niels, Moser, Claus Ernst & Sams, T., 21 Apr 2016, In: P L o S One. 11, 4, 11 p., e0153616.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Direct and indirect effects in the regulation of overlapping promoters

    Bendtsen, K. M., Erdossy, J., Csiszovski, Z., Svenningsen, Sine Lo, Sneppen, Kim, Krishna, S. & Semsey, S., 2011, In: Nucleic Acids Research. 39, 16, p. 6879-6885 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  40. Published

    Distributions of Self Interactions and Voids in 1+1d Directed Percolation

    Huber, G., Jensen, Mogens Høgh & Sneppen, Kim, 1 Sep 1995, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 52, 3, p. 2133-2136

    Research output: Contribution to journal › Journal article › Research

  41. Published

    Diversity Waves in Collapse-Driven Population Dynamics

    Maslov, S. & Sneppen, Kim, 1 Sep 2015, In: P L o S One. 11, 9, e1004440.

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Diversity and ecotones in a model ecosystems of sessile species

    Hofer, M. & Sneppen, Kim, 20 Feb 2024, In: Physical Review E. 109, 2, 7 p., 024309.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Dominant negative autoregulation limits steady-state repression levels in gene networks

    Semsey, S., Krishna, S., Erdossy, J., Horvath, P., Orosz, L., Sneppen, Kim & Adhya, S., 2009, In: Journal of Bacteriology. 191, 14, p. 4487-4491 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  44. Dominant negative autoregulation limits steady-state repression levels in gene networks

    Semsey, S., Krishna, S., Erdossy, J., Horváth, P., Orosz, L., Sneppen, Kim & Adhya, S., Jul 2009, In: Journal of Bacteriology. 191, 14, p. 4487-91 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Dynamic competition between transcription initiation and repression: Role of nonequilibrium steps in cell-to-cell heterogeneity

    Mitarai, Namiko, Semsey, S. & Sneppen, Kim, 13 Aug 2015, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 92, 2, 022710.

    Research output: Contribution to journal › Journal article › Research › peer-review

  46. Published

    Dynamic features of gene expression control by small regulatory RNAs

    Mitarai, Namiko, Bemjamin, J., Krishna, S., Semsey, S., Csiszovszki, Z., Masse, E. & Sneppen, Kim, 2009, In: Proceedings of the National Academy of Science of the United States of America. 106, 26, p. 10655-10659 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Dynamic features of gene expression control by small regulatory RNAs

    Mitarai, Namiko, Benjamin, J. M., Krishna, S., Semsey, S., Csiszovszki, Z., Massé, E. & Sneppen, Kim, 30 Jun 2009, In: Proceedings of the National Academy of Sciences of the United States of America. 106, 26, p. 10655-9 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  48. Published

    Dynamical analysis on gene activity in the presence of repressors and an interfering promoter

    Nakanishi, H., Mitarai, Namiko & Sneppen, Kim, 1 Nov 2008, In: Biophysical Journal. 95, 9, p. 4228-4240

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    Dynamical genetic regulation

    Jensen, Mogens Høgh, Krishna, S., Sneppen, Kim & Tiana, G., 2008, Springer. (Evolution from cellular to social scales, book series: Nato security through science series B: Physics and biophysics.Conference of the Nato-advanced study institute on evolution from cellular to social scales geilo, Norway april 10-20,2007, p.61-68.).

    Research output: Book/Report › Book › Research › peer-review

  50. Published

    Dynamics of the recovery from sRNA-mediated gene silencing

    Semsey, S., Bemjamin, J., Mitarai, Namiko, Krishna, S., Csiszovszki, Z., Sneppen, Kim & Masse, E., 2009, In: Cell Cycle. 8, 18, p. 2863-2864 1 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  51. Published

    Dynamics of uptake and metabolism of small molecules in cellular response systems

    Werner, M., Semsey, S., Sneppen, Kim & Krishna, S., 2009, In: PLoS ONE. 4, 3, p. e4923

    Research output: Contribution to journal › Journal article › Research › peer-review

  52. Dynamics of uptake and metabolism of small molecules in cellular response systems

    Werner, M., Semsey, S., Sneppen, Kim & Krishna, S., 2009, In: P L o S One. 4, 3, p. e4923

    Research output: Contribution to journal › Journal article › Research › peer-review

  53. Published

    Economy of operon formation: cotranscription minimizes shortfall in protein complexes

    Sneppen, Kim, Pedersen, Steen, Krishna, S., Dodd, I. B. & Semsey, S., 21 Sep 2010, In: Microbe. 1, 4, p. e00177-10

    Research output: Contribution to journal › Journal article › Research › peer-review

  54. Published

    Ecosystems with Mutually Exclusive Interactions Self-Organize to a State of High Diversity

    Mathiesen, Joachim, Mitarai, Namiko, Sneppen, Kim & Trusina, Ala, 25 Oct 2011, In: Physical Review Letters. 107, 18, p. 188101

    Research output: Contribution to journal › Journal article › Research › peer-review

  55. Published

    Effect of supercoiling on the λ switch

    Norregaard, K., Andersson, M., Sneppen, Kim, Nielsen, Peter E., Brown, Stanley & Oddershede, L. B., 1 Jan 2014, In: Bacteriophage. 4, 2, p. 1-5 5 p., e27517.

    Research output: Contribution to journal › Journal article › Research › peer-review

  56. Published

    Efficient chromosomal-scale DNA looping in Escherichia coli using multiple DNA-looping elements

    Hao, N., Sneppen, Kim, Shearwin, K. E. & Dodd, I. B., 19 May 2017, In: Nucleic Acids Research. 45, 9, p. 5074-5085

    Research output: Contribution to journal › Journal article › Research › peer-review

  57. Published

    Efficient degradation and expression prioritization with small RANs

    Mitarai, Namiko, Andersson, A. M. C., Krishna, S., Semsey, S. & Sneppen, Kim, 2007, In: Physical Biology. 4, 3, p. 164-171

    Research output: Contribution to journal › Journal article › Research › peer-review

  58. Published

    Emergence and decline of scientific paradigms

    Bornholdt, S., Jensen, Mogens Høgh & Sneppen, Kim, 2 Feb 2011, In: Physical Review Letters. 106, 5, p. 058701 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  59. Published

    Emergence of diversity in a model ecosystem

    Mitarai, Namiko, Mathiesen, Joachim & Sneppen, Kim, 30 Jul 2012, In: Physical Review E. Statistical, Nonlinear, and Soft Matter Physics. 86, 1, p. 011929 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  60. Published

    Emergence of networks of shared restriction-modification systems in phage-bacteria ecosystems

    Eriksen, R. S., Malhotra, N., Seshasayee, A. S. N., Sneppen, Kim & Krishna, S., 2022, In: Journal of Biosciences. 47, 3, 19 p., 38.

    Research output: Contribution to journal › Journal article › Research › peer-review

  61. Published

    Emerging diversity in a population of evolving intransitive dice

    Kirkegaard, Julius Bier & Sneppen, Kim, 17 Nov 2022, In: Physical Review E. 106, 5, 6 p., 054409.

    Research output: Contribution to journal › Journal article › Research › peer-review

  62. Published

    Epigenetic switching with asymmetric bridging interactions

    Skjegstad, L. E. J., Nickels, Jan Fabio, Sneppen, Kim & Kirkegaard, Julius Bier, 20 Jun 2023, In: Biophysical Journal. 122, 12, p. 2421-2429 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  63. Published

    Epigenetics as a first exit problem

    Sneppen, Kim & Aurell, E., 2002, In: Physical Review Letters. 88, 4, p. 048101 1 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  64. Published

    Establishment of heterochromatin in domain-size-dependent bursts

    Nickels, Jan Fabio, Edwards, A. K., Charlton, Sebastian Jespersen, Mortensen, A. M., Hougaard, S. C. L., Trusina, Ala, Sneppen, Kim & Thon, Genevieve, 13 Apr 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 15, 11 p., e2022887118.

    Research output: Contribution to journal › Journal article › Research › peer-review

  65. Published

    Existence and construction of large stable food webs

    Härter, Jan Olaf Mirko, Mitarai, Namiko & Sneppen, Kim, 8 Sep 2017, In: Physical Review E. 96, 3, 032406.

    Research output: Contribution to journal › Journal article › Research › peer-review

  66. Published

    Exploring the Link between Nucleosome Occupancy and DNA Methylation

    Lövkvist, Cecilia, Sneppen, Kim & Härter, Jan Olaf Mirko, 12 Jan 2018, In: Frontiers in Genetics. 8, 7 p., 232.

    Research output: Contribution to journal › Journal article › Research › peer-review

  67. Published

    Exploring the contribution of exposure heterogeneity to the cessation of the 2014 Ebola epidemic

    Uekermann, F., Simonsen, L. & Sneppen, Kim, 1 Feb 2019, In: PLoS ONE. 14, 2, 11 p., e0210638.

    Research output: Contribution to journal › Review › Research › peer-review

  68. Published

    Fast Translation within the First 45 Codons Decreases mRNA Stability and Increases Premature Transcription Termination in E. coli

    Pedersen, Steen, Terkelsen, Thilde Bagger, Eriksen, M., Hauge, M. K., Lund, C. C., Sneppen, Kim & Mitarai, Namiko, 2019, In: Journal of Molecular Biology. 431, 6, p. 1088-1097 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  69. Published

    Fear and its implications for stock markets

    Simonsen, I., Ahlgren, P. H., Jensen, Mogens Høgh, Danangelo, R. & Sneppen, Kim, 2007, In: European Physical Journal B. Condensed Matter and Complex Systems. 57, 2, p. 153-158

    Research output: Contribution to journal › Journal article › Research › peer-review

  70. Published

    Flow effects in intermediate-energy nuclear collisions

    Barz, H. W., Bondorf, J. P., Donangelo, R., Elmér, R., Hansen, F. S., Jakobsson, B., Karlsson, L., Nifenecker, H., Schulz, H., Schussler, F., Sneppen, Kim & Söderström, K., 2 Sep 1991, In: Nuclear Physics, Section A. 531, 2, p. 453-460 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  71. Published

    Food Web Assembly Rules for Generalized Lotka-Volterra Equations

    Härter, Jan Olaf Mirko, Mitarai, Namiko & Sneppen, Kim, Feb 2016, In: PLoS Computational Biology. 12, 2, e1004727.

    Research output: Contribution to journal › Journal article › Research › peer-review

  72. Published

    Four simple rules that are sufficient to generate the mammalian blastocyst

    Nissen, Silas Boye, Perera Pérez, Marta, Martin Gonzalez, Javier, Morgani, S. M. C., Jensen, Mogens Høgh, Sneppen, Kim, Brickman, Joshua Mark & Trusina, Ala, 12 Jul 2017, In: PLOS Biology. 15, 7, p. 1-30 e2000737.

    Research output: Contribution to journal › Journal article › Research › peer-review

  73. Published

    From kill the winner to eliminate the winner in open phage-bacteria systems

    Marantos, Anastasios, Mitarai, Namiko & Sneppen, Kim, 8 Aug 2022, In: PLOS Computational Biology. 18, 8, 15 p., e1010400.

    Research output: Contribution to journal › Journal article › Research › peer-review

  74. Published

    Frustration driven stock market dynamics: Leverage effect and asymmetry

    Heden Ahlgren, P. T., Jensen, Mogens Høgh, Simonsen, I., Donangelo, R. & Sneppen, Kim, 2007, In: Physica A: Statistical Mechanics and its Applications. 383, 1, p. 1-4 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  75. Published

    Functional alignment of regulatory networks: a study of temperate phages

    Trusina, Ala, Sneppen, Kim, Dodd, I. B., Shearwin, K. E. & Egan, J. B., 2006, In: PLoS Computational Biology. 1, 7, p. 599-603

    Research output: Contribution to journal › Journal article › Research › peer-review

  76. Published

    Gene duplication models for directed networks with limits on growth

    Enemark, J. & Sneppen, Kim, 2008, In: Journal of Statistical Mechanics: Theory and Experiment. 2007, p. P11007

    Research output: Contribution to journal › Journal article › Research › peer-review

  77. Published

    Genetic Regulatory Networks that count to 3

    Lehmann, M. & Sneppen, Kim, 1 Jul 2013, In: Journal of Theoretical Biology. 329, p. 15-19 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  78. Published

    Genetic regulation of fluxes: iron homeostasis escherichia coli

    Semsey, S., Andersson, A. M. C., Krishna, S., Jensen, Mogens Høgh, Massé, E. & Sneppen, Kim, 2006, In: Nucleic Acids Research. 34, 17, p. 4960-4967

    Research output: Contribution to journal › Journal article › Research › peer-review

  79. Genetic regulation of fluxes: iron homeostasis of Escherichia coli

    Semsey, S., Andersson, A. M. C., Krishna, S., Jensen, Mogens Høgh, Massé, E. & Sneppen, Kim, 2006, In: Nucleic Acids Research. 34, 17, p. 4960-7 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  80. Published

    Globalization in a nutshell

    Sneppen, Kim & Bornholdt, S., 29 Oct 2018, In: Physical Review E. 98, 4, 6 p., 022314.

    Research output: Contribution to journal › Journal article › Research › peer-review

  81. Published

    Hide-and-seek on complex networks

    Sneppen, Kim, Trusina, Ala & Rosvall, M., Mar 2005, In: EPL. 69, 5, p. 853-859

    Research output: Contribution to journal › Journal article › Research › peer-review

  82. Published

    Hierarchy and anti-hierarchy in real and scale free networks

    Sneppen, Kim & Minnhagen, P., 2004, In: Physical Review Letters. 92, p. 178702

    Research output: Contribution to journal › Journal article › Research › peer-review

  83. Published

    Hierarchy measures in complex networks

    Trusina, Ala, Maslov, S., Minnhagen, P. & Sneppen, Kim, 30 Apr 2004, In: Physical Review Letters. 92, 17, 178702.

    Research output: Contribution to journal › Journal article › Research › peer-review

  84. Published

    Hitchhiking, collapse, and contingency in phage infections of migrating bacterial populations

    Ping, D., Wang, T., Fraebel, D. T., Maslov, S., Sneppen, Kim & Kuehn, S., 1 Aug 2020, In: ISME Journal. 14, 8, p. 2007-2018 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  85. Published

    Host heterogeneity and epistasis explain punctuated evolution of SARS-CoV-2

    Nielsen, Bjarke Frost, Saad-roy, C. M., Li, Y., Sneppen, Kim, Simonsen, L., Viboud, C., Levin, S. A., Grenfell, B. T. & Morozov, A. V. (ed.), 15 Feb 2023, In: PLOS Computational Biology. 19, 2, 24 p., e1010896.

    Research output: Contribution to journal › Journal article › Research › peer-review

  86. Published

    Information spreading and development of cultural centers

    Dybiec, B. M., Mitarai, Namiko & Sneppen, Kim, 18 May 2012, In: Physical Review E. Statistical, Nonlinear, and Soft Matter Physics. 85, 5, p. 056116 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  87. Published

    Jag1-Notch cis-interaction determines cell fate segregation in pancreatic development

    sgk681, sgk681, Seymour, Philip Allan, Sneppen, Kim, Trusina, Ala, Egeskov-Madsen, A. L. R., Jørgensen, Mette Christine, Jensen, Mogens Høgh & Serup, Palle, 2023, In: Nature Communications. 14, 17 p., 348.

    Research output: Contribution to journal › Journal article › Research › peer-review

  88. Published

    Key players in the genetic switch of bacteriophage TP901-1.

    Alsing, A., Pedersen, M., Sneppen, Kim & Hammer, K., 19 Jan 2011, In: Biophysical Journal. 100, 2, p. 313-321 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  89. Published

    Komolgorov scaling from random force fields

    Jensen, Mogens Høgh, Sneppen, Kim & Angheluta, L., 2008, In: EPL. 84, 1, p. 10011 5 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  90. Published

    Kronik: Risikobaseret genåbning af Danmark kan give færre alvorligt syge og en hurtigere genåbning

    Kirkeby, Carsten, Græsbøll, K., Halasa, T., Sneppen, Kim & Christiansen, L. E., 2020, In: Ingenøren.dk.

    Research output: Contribution to journal › Journal article › Communication

  91. Published

    Labyrinthine clustering in a spatial rock-paper-scissors ecosystem

    Juul, J. S., Sneppen, Kim & Mathiesen, Joachim, 8 Apr 2013, In: Physical Review E. Statistical, Nonlinear, and Soft Matter Physics. 87, 4, p. 042702 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  92. Published

    Locally self-organized quasicritical percolation in a multiple-disease model

    Juul, J. S. & Sneppen, Kim, 30 Sep 2011, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 84, 3, p. 0036119 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  93. Published

    Lockdowns exert selection pressure on overdispersion of SARS-CoV-2 variants

    Nielsen, Bjarke Frost, Eilersen, Andreas Thomas, Simonsen, L. & Sneppen, Kim, 2 Sep 2022, In: Epidemics. 40, 7 p., 100613.

    Research output: Contribution to journal › Journal article › Research › peer-review

  94. Published

    Longevity of orders in related to the longevity of their constituent genera rather then genus richness

    Bornholdt, S., Sneppen, Kim & Westphal, H., 2006, In: Theory in Biosciences. 128, 2, p. 75-83 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  95. Published

    Measuring information networks

    Sneppen, Kim, Trusina, Ala & Rosvall, M., Jun 2005, In: Pramana – Journal of Physics. 64, 6, p. 1121-1125

    Research output: Contribution to journal › Journal article › Research › peer-review

  96. Published

    Minimal Gene Regulatory Circuits that Can Count like Bacteriophage Lambda

    Avlund, M., Dodd, I. B., Sneppen, Kim & Krishna, S., 11 Dec 2009, In: Journal of Molecular Biology. 394, 4, p. 681-693

    Research output: Contribution to journal › Journal article › Research › peer-review

  97. Published

    Minimal gene regulatory circuits for a lysis-lysogeny choice in the presence of noise

    Avlund, M., Krishna, S., Semsey, S., Dodd, I. B. & Sneppen, Kim, 20 Dec 2010, In: PLoS ONE. 5, 12, p. 0015037 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  98. Published

    Minimal model of spiky oscillations in NF-kB signaling

    Krishna, S., Jensen, Mogens Høgh & Sneppen, Kim, 2006, In: Proceedings of the National Academy of Science of the United States of America. 103, 4, p. 10840-10845

    Research output: Contribution to journal › Journal article › Research › peer-review

  99. Published

    Mismatch repair at stop codons is directed independent of GATC methylation on the Escherichia coli chromosome

    Sneppen, Kim & Semsey, S., 5 Dec 2014, In: Scientific Reports. 4, 7436.

    Research output: Contribution to journal › Journal article › Research › peer-review

  100. Published

    Model to Link Cell Shape and Polarity with Organogenesis

    Nielsen, Bjarke Frost, Nissen, Silas Boye, Sneppen, Kim, Mathiesen, Joachim & Trusina, Ala, 10 Jan 2020, In: iScience. 23, 2, p. 1-10 10 p., 100830.

    Research output: Contribution to journal › Journal article › Research › peer-review

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