Namiko Mitarai
Associate Professor
Biocomplexity
Blegdamsvej 17
2100 København Ø
- Published
A growing microcolony can survive and support persistent propagation of virulent phages
Eriksen, R. S., Svenningsen, Sine Lo, Sneppen, Kim & Mitarai, Namiko, 1 Jan 2018, In: Proceedings of the National Academy of Sciences USA (PNAS). 115, 2, p. 337-342Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A scaling law of multilevel evolution: how the balance between within- and among-collective evolution is determined
Takeuchi, N., Mitarai, Namiko & Kaneko, Kunihiko, 4 Feb 2022, In: Genetics. 220, 2, 9 p., 182.Research output: Contribution to journal › Journal article › Research › peer-review
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Anomalous fluctuations in sliding motion of cytoskeletal filaments driven by molecular motors: Model simulations
Imafuku, Y., Mitarai, Namiko, Tawada, K. & Nakanishi, H., 7 Feb 2008, In: Journal of Physical Chemistry Part B: Condensed Matter, Materials, Surfaces, Interfaces & Biophysical. 112, 5, p. 1487-1493Research output: Contribution to journal › Journal article › Research › peer-review
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Axelrod model: accepting or discussing
Dybiec, B. M., Mitarai, Namiko & Sneppen, Kim, 1 Oct 2012, In: European Physical Journal B. Condensed Matter and Complex Systems. 85, 10, p. 357Research output: Contribution to journal › Journal article › Research › peer-review
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Bagnold scaling, density plateau, and kinetic theory analysis of dense granular flow
Mitarai, Namiko & Nakanishi, H., 1 Apr 2005, In: Physical Review Letters. 94, 12, p. 128001 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Bifurcation of transition paths induced by coupled bistable systems
Tian, C. & Mitarai, Namiko, 7 Jun 2016, In: The Journal of Chemical Physics. 144, 21, 215102.Research output: Contribution to journal › Journal article › Research › peer-review
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Birth and Resuscitation of (p)ppGpp Induced Antibiotic Tolerant Persister Cells
Svenningsen, Mikkel Skjoldan, Veress, A., Harms, A., Mitarai, Namiko & Semsey, S., 15 Apr 2019, In: Scientific Reports. 9, 13 p., 6056.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Broad distribution of stick-slip events in slowly sheared granular media: Table-top production of a Gutenberg-Richter-like distribution
Bretz, M., Zaretzki, R., Field, S., Mitarai, Namiko & Nori, F., 2 Jun 2006, In: EPL. 74, 6, p. 1116-1122Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Characterization of phase transitions in a model ecosystem of sessile species
Uekermann, F., Mathiesen, Joachim & Mitarai, Namiko, 13 Mar 2017, In: Physical Review E. 95, 3, 032409.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Circuit architecture explains functional similarity of bacterial heat shock responses
Masayo, I., Mitarai, Namiko & Trusina, Ala, 1 Dec 2012, In: Physical Biology. 9, 6, p. 066003Research output: Contribution to journal › Journal article › Research › peer-review
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Collisional granular flow as a micropolar fluid
Mitarai, Namiko, Hayakawa, H. & Nakanishi, H., 29 Apr 2002, In: Physical Review Letters. 88, 17, 174301.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Conditional Cooperativity in Toxin-Antitoxin Regulation Prevents Random Toxin Activation and Promotes Fast Translational Recovery
Cataudella, I., Trusina, Ala, Sneppen, Kim, Gerdes, K. & Mitarai, Namiko, 11 Apr 2012, In: Nucleic Acids Research. 40, 14, p. 6424-6434Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Conditional Cooperativity of Toxin - Antitoxin Regulation Can Mediate Bistability between Growth and Dormancy
Cataudella, I., Sneppen, Kim, Gerdes, K. & Mitarai, Namiko, 1 Aug 2013, In: PLoS Computational Biology. 9, 8, e1003174.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Control of ribosome traffic by position-dependent choice of synonymous codons
Mitarai, Namiko & Pedersen, Steen, 8 Oct 2013, In: Physical Biology. 10, 5, 056011.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Convective instability and structure formation in traffic flow
Mitarai, Namiko & Nakanishi, H., 2 Nov 2000, In: Journal of the Physical Society of Japan. 69, 11, p. 3752-3761Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Coupled positive and negative feedbacks produce diverse gene expression patterns in colonies
Mitarai, Namiko, Jensen, Mogens Høgh & Semsey, S., 7 Apr 2015, In: mBio (Print). 6, 2, e00059-15 .Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Deterministic extinction by mixing in cyclically competing species
Feldager, C. W., Mitarai, Namiko & Ohta, H., 20 Mar 2017, In: Physical Review E. 95, 3, 032318.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Distinct Survival, Growth Lag, and rRNA Degradation Kinetics during Long-Term Starvation for Carbon or Phosphate
Himeoka, Y., Gummesson, Bertil, Sørensen, Michael Askvad, Svenningsen, Sine Lo & Mitarai, Namiko, 20 Apr 2022, In: mSphere. 7, 3, 12 p., e01006-21.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Disturbance accelerates the transition from low- to high-diversity state in a model ecosystem
Botta, F. & Mitarai, Namiko, 4 Feb 2014, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 89, 2, 022704.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Dynamic Modeling of Indole Glucosinolate Hydrolysis and Its Impact on Auxin Signaling
Vik, D., Mitarai, Namiko, Wulff, N., Halkier, Barbara Ann & Burow, Meike, 2018, In: Frontiers in Plant Science. 9, 16 p., 550.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Dynamic competition between transcription initiation and repression: Role of nonequilibrium steps in cell-to-cell heterogeneity
Mitarai, Namiko, Semsey, S. & Sneppen, Kim, 13 Aug 2015, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 92, 2, 022710.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Dynamic features of gene expression control by small regulatory RNAs
Mitarai, Namiko, Bemjamin, J., Krishna, S., Semsey, S., Csiszovszki, Z., Masse, E. & Sneppen, Kim, 2009, In: Proceedings of the National Academy of Science of the United States of America. 106, 26, p. 10655-10659 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
Dynamic features of gene expression control by small regulatory RNAs
Mitarai, Namiko, Benjamin, J. M., Krishna, S., Semsey, S., Csiszovszki, Z., Massé, E. & Sneppen, Kim, 30 Jun 2009, In: Proceedings of the National Academy of Sciences of the United States of America. 106, 26, p. 10655-9 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Dynamical analysis on gene activity in the presence of repressors and an interfering promoter
Nakanishi, H., Mitarai, Namiko & Sneppen, Kim, 1 Nov 2008, In: Biophysical Journal. 95, 9, p. 4228-4240Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Dynamics of bacterial populations under the feast-famine cycles
Himeoka, Y. & Mitarai, Namiko, 27 Mar 2020, In: Physical Review Research. 2, 1, 15 p., 013372.Research output: Contribution to journal › Journal article › Research › peer-review
ID: 12071632
Most downloads
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1919
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The functional half-life of an mRNA depends on the ribosome spacing in an early coding region
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
1475
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Conditional Cooperativity of Toxin - Antitoxin Regulation Can Mediate Bistability between Growth and Dormancy
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
846
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Speciation, diversification, and coexistence of sessile species that compete for space
Research output: Contribution to journal › Journal article › Research › peer-review
Published