https://nbi.ku.dk/english/theses/masters-theses/masters-theses-biocomplexity-biophysics/ en Tue, 07 Apr 2026 08:41:45 +0200 Tue, 07 Apr 2026 08:41:45 +0200 https://nbi.ku.dk/english/theses/masters-theses/patrizio-cugia-di-sant-orsola/ Title: Statistical Analyses of Multicellular Active Trajectories Supervisor: Amin Doostmohammadi https://nbi.ku.dk/english/theses/masters-theses/patrizio-cugia-di-sant-orsola/ Wed, 17 Jan 2024 12:45:00 +0100 https://nbi.ku.dk/english/theses/masters-theses/ariel-avanzi/ Title: Mechanics of multi-layer cellular system Supervisor: Amin Doostmohammadi https://nbi.ku.dk/english/theses/masters-theses/ariel-avanzi/ Sun, 10 Sep 2023 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/mikkel-peter-andersen/ Title: Thermodynamics and optimal control of active systems Supervisor: Karel Proesmans https://nbi.ku.dk/english/theses/masters-theses/mikkel-peter-andersen/ Tue, 15 Aug 2023 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/huiling-wang/ Title: The control of quantized conduction events in lipid membranes by anesthetics Supervisor: Thomas... https://nbi.ku.dk/english/theses/masters-theses/huiling-wang/ Fri, 07 Jul 2023 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/nathanael-van-den-berg/ Title: Experimental study of bacterial cell shape's role in competition: elongated cells win in expanding... https://nbi.ku.dk/english/theses/masters-theses/nathanael-van-den-berg/ Tue, 13 Jun 2023 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/morten-ulrik-hvid/ Title: Bacteriophage Lysis Inhibition - A Modeling Approach Supervisor: Namiko Mitarai https://nbi.ku.dk/english/theses/masters-theses/morten-ulrik-hvid/ Tue, 06 Jun 2023 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/haochun-sun/ Title: Three-Dimensional Modeling of Active Cell Assemblies Supervisor: Amin Doostmohammadi https://nbi.ku.dk/english/theses/masters-theses/haochun-sun/ Thu, 01 Jun 2023 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/hazal-polat/ Title: Investigation of Poly-aneuploid cancer cells motility in 3D Supervisors: Liselotte Jauffred, Veneta... https://nbi.ku.dk/english/theses/masters-theses/hazal-polat/ Tue, 09 Aug 2022 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/chun-lung-johnny-tong/ Title: Modelling Bacteriophage Communication Strategies Supervisor: Namiko Mitarai https://nbi.ku.dk/english/theses/masters-theses/chun-lung-johnny-tong/ Tue, 31 May 2022 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/lars-erik-johnsen-skjegstad/ Title: Computational Nucleosome Dynamics in 3D - Epigenetic Switching and Pressure Potential Effects... https://nbi.ku.dk/english/theses/masters-theses/lars-erik-johnsen-skjegstad/ Fri, 20 May 2022 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/markus-hofer/ Title: Ecosystems of Sessile Species in Inhomogeneous Environments Supervisor: Kim Sneppen https://nbi.ku.dk/english/theses/masters-theses/markus-hofer/ Fri, 20 May 2022 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/lasse-frederik-bonn/ Title: Fluctuation-induced motility of topological defects Supervisor: Amin Doostmohammadi https://nbi.ku.dk/english/theses/masters-theses/lasse-frederik-bonn/ Fri, 20 May 2022 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/michael-forsmann/ Title: Regulatory Gene-Gene networks based on regression trees Supervisor: Ala Trusina https://nbi.ku.dk/english/theses/masters-theses/michael-forsmann/ Fri, 20 May 2022 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/paula-melero-martinez/ Title: Application of non-invasive MR imaging for the mouse brain water mobility and content assessment... https://nbi.ku.dk/english/theses/masters-theses/paula-melero-martinez/ Fri, 20 May 2022 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/salik-ahmad-sultan/ Title: Activity induced Patterns in Active Matter Supervisor: Amin Doostmohammadi https://nbi.ku.dk/english/theses/masters-theses/salik-ahmad-sultan/ Tue, 15 Feb 2022 12:45:00 +0100 https://nbi.ku.dk/english/theses/masters-theses/andreas-eilersen/ Population dynamics and diseases Supervisor: Kim Sneppen https://nbi.ku.dk/english/theses/masters-theses/andreas-eilersen/ Thu, 10 Feb 2022 12:45:00 +0100 https://nbi.ku.dk/english/theses/masters-theses/nikka-mosleh/ Title: Elastic objects ejected from harmonic plate Supervisor: Joachim Mathiesen https://nbi.ku.dk/english/theses/masters-theses/nikka-mosleh/ Mon, 03 Jan 2022 12:45:00 +0100 https://nbi.ku.dk/english/theses/masters-theses/simon-ulrik-hilbard/ Title: Diffusion of toxins out of medical devices - Comparing analytical and numerical models Supervisor:... https://nbi.ku.dk/english/theses/masters-theses/simon-ulrik-hilbard/ Thu, 02 Dec 2021 12:45:00 +0100 https://nbi.ku.dk/english/theses/masters-theses/victoria-thusgaard-ruhoff/ Title: Assessment of Crowding by Viral Spike Protein Neuraminidase as a Potential Driver for Membrane... https://nbi.ku.dk/english/theses/masters-theses/victoria-thusgaard-ruhoff/ Mon, 01 Nov 2021 12:45:00 +0100 https://nbi.ku.dk/english/theses/masters-theses/mirjam-partovi-dilami/ Title: Agent Based Modelling of Companies in a Globalized Market Supervisor: Kim Sneppen https://nbi.ku.dk/english/theses/masters-theses/mirjam-partovi-dilami/ Mon, 01 Nov 2021 12:45:00 +0100 https://nbi.ku.dk/english/theses/masters-theses/silja-borring-laastad/ Title: Survival tactics of a microscopic enemy Supervisor: Namiko Mitarai https://nbi.ku.dk/english/theses/masters-theses/silja-borring-laastad/ Fri, 29 Oct 2021 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/emilie-kok/ Title: Transport of novel peptides across the intestinal barrier Supervisors: Arjen Weller, Jannik... https://nbi.ku.dk/english/theses/masters-theses/emilie-kok/ Tue, 31 Aug 2021 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/alba-garcia-vazquez/ Title: Planet Earth-like patterns in three-dimensional multi-species bacterial colonies Supervisor: Liselotte... https://nbi.ku.dk/english/theses/masters-theses/alba-garcia-vazquez/ Mon, 30 Aug 2021 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/reyk-borner/ Modeling diurnal sea surface warming in the tropical ocean Supervisor: Jan O. Haerter, Romain... https://nbi.ku.dk/english/theses/masters-theses/reyk-borner/ Mon, 16 Aug 2021 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/anastassia-vybornova/ Title: Identifying and classifying gaps in the bicycle network of Copenhagen Supervisors: Kim Sneppen,... https://nbi.ku.dk/english/theses/masters-theses/anastassia-vybornova/ Sun, 15 Aug 2021 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/johan-fridrik-kjoelbro/ Title: Cold Pools & Convective Organization Supervisor: Jan Olaf Mirko Harter https://nbi.ku.dk/english/theses/masters-theses/johan-fridrik-kjoelbro/ Mon, 02 Aug 2021 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/liv-moretto-soerensen/ Title: Period variations in the p53 network after protein inhibition Supervisors: Mogens Høgh... https://nbi.ku.dk/english/theses/masters-theses/liv-moretto-soerensen/ Fri, 30 Jul 2021 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/maria-cristina-pires-clerigo/ Title: MED24, a tail component of the Mediator complex, links FGF/ERK signaling to nuclear receptor... https://nbi.ku.dk/english/theses/masters-theses/maria-cristina-pires-clerigo/ Wed, 28 Jul 2021 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/gidega-vijayakumar/ Title: Multiparametric quantification of tissue integrity in the knee using MRI Supervisors: Bryan... https://nbi.ku.dk/english/theses/masters-theses/gidega-vijayakumar/ Tue, 27 Jul 2021 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/dana-taylor-kamp/ Title: Numerical solutions to the self-contained soliton model - and the potential connection between... https://nbi.ku.dk/english/theses/masters-theses/dana-taylor-kamp/ Tue, 20 Jul 2021 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/miguel-garrido-zornoza/ Title: Effects of Diffusion-limited Aggregation on Bacterial Systems Supervisor: Namiko Mitarai https://nbi.ku.dk/english/theses/masters-theses/miguel-garrido-zornoza/ Mon, 31 May 2021 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/mireia-cordero-sanchez/ Title: Study of three-dimensional bacterial colonies: how expression of motility and adhesion factors... https://nbi.ku.dk/english/theses/masters-theses/mireia-cordero-sanchez/ Mon, 31 May 2021 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/maria-tangen-soegaard/ Title: Effect of Tumor Extracellular Matrix on T cell Activity Supervisors: Ala Trusina, Daniel H. Madsen,... https://nbi.ku.dk/english/theses/masters-theses/maria-tangen-soegaard/ Thu, 20 May 2021 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/fynn-wolf/ Title: Modeling of the euglycemic hyperinsulinemic clamp experiment using Bayesian inference Supervisors:... https://nbi.ku.dk/english/theses/masters-theses/fynn-wolf/ Thu, 20 May 2021 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/andreas-berglund/ Title: Batch Noise & Gene/Gene Correlations in Single Cell RNA Sequencing Data Supervisors: Ala Trusina,... https://nbi.ku.dk/english/theses/masters-theses/andreas-berglund/ Thu, 20 May 2021 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/louise-marie-krogsgaard-madsen/ Title: Coupling dynamics of membrane bending proteins for COPII vesicle formation Supervisor: Ala Trusina... https://nbi.ku.dk/english/theses/masters-theses/louise-marie-krogsgaard-madsen/ Thu, 20 May 2021 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/martin-moeller-larsen/ Title: The Shape Of Three Dimensional Bacterial Colonies Supervisors: Liselotte Jauffred, Namiko Mitarai... https://nbi.ku.dk/english/theses/masters-theses/martin-moeller-larsen/ Thu, 01 Apr 2021 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/alisa-agafonova/ Title: Structural properties and expression pattern of evolved Boolean networks Supervisor: Kim... https://nbi.ku.dk/english/theses/masters-theses/alisa-agafonova/ Tue, 30 Mar 2021 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/marc-plana-caballero/ Mesoscopic chemical clocks in coupled compartments Supervisors: Mogens H. Jensen and Mathias Heltberg... https://nbi.ku.dk/english/theses/masters-theses/marc-plana-caballero/ Wed, 30 Sep 2020 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/nicola-garlet/ Title: Population dynamics of viruses and defective interfering particles Supervisor: Namiko Mitarai https://nbi.ku.dk/english/theses/masters-theses/nicola-garlet/ Wed, 30 Sep 2020 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/thomas-langemark-trojahn/ Emergent Growth of Intestinal Organoid Crypts from Novel Cell-Polarity Model Supervisor: Ala Trusina https://nbi.ku.dk/english/theses/masters-theses/thomas-langemark-trojahn/ Mon, 31 Aug 2020 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/mads-holst-aagaard-madsen/ A Direct Numerical Simulation study of transitional turbulence using the Finite Element Method Supervisor: Joachim... https://nbi.ku.dk/english/theses/masters-theses/mads-holst-aagaard-madsen/ Fri, 05 Aug 2016 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/aske-krogsgaard/ Physics of nerves: Actionpotentials in Lumbricus Terrestrisaxons in the presence of anaesthetics and... https://nbi.ku.dk/english/theses/masters-theses/aske-krogsgaard/ Sun, 05 Jun 2016 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/tea-muzic/ The effect of Anesthetics on Phase Transitions in Biological Membranes Supervisor: Thomas Rainer... https://nbi.ku.dk/english/theses/masters-theses/tea-muzic/ Tue, 31 May 2016 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/fatma-tounsi/ THE CORRELATION BETWEEN CRITICAL ANAESTHETIC DOSE AND MELTING TEMPERATURES IN SYNTHETIC MEMBRANES Supervisor: Thomas... https://nbi.ku.dk/english/theses/masters-theses/fatma-tounsi/ Wed, 25 Nov 2015 12:45:00 +0100 https://nbi.ku.dk/english/theses/masters-theses/ajmal-faizi/ Building a Fluorescence Correlation Spectroscopy Setup Supervisor: Thomas Rainer Heimburg https://nbi.ku.dk/english/theses/masters-theses/ajmal-faizi/ Fri, 20 Feb 2015 12:45:00 +0100 https://nbi.ku.dk/english/theses/masters-theses/soeren-nissen/ A Study of Solitons in Biological Membranes and Neurons Supervisor: Thomas Rainer Heimburg https://nbi.ku.dk/english/theses/masters-theses/soeren-nissen/ Mon, 31 Mar 2014 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/frederik-becher/ The Relation Between Enthalpy And Volume Change Supervisor: Thomas Rainer Heimburg https://nbi.ku.dk/english/theses/masters-theses/frederik-becher/ Mon, 31 Mar 2014 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/stanislav-landa/ Influence of voltage on phase behaviour of membranes Supervisor: Thomas Rainer Heimburg https://nbi.ku.dk/english/theses/masters-theses/stanislav-landa/ Wed, 31 Jul 2013 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/karis-amata-zecchi/ Electro-mechanical properties of lipid membranes at their phase transition Supervisor: Thomas Rainer... https://nbi.ku.dk/english/theses/masters-theses/karis-amata-zecchi/ Fri, 31 May 2013 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/soeren-blok-madsen/ Thermodynamics of nerves https://nbi.ku.dk/english/theses/masters-theses/soeren-blok-madsen/ Mon, 14 Nov 2011 12:45:00 +0100 https://nbi.ku.dk/english/theses/masters-theses/lars-dalskov-mosgaard/ Propagation of Sound in Lipid Membranes Supervisor: Thomas Rainer Heimburg https://nbi.ku.dk/english/theses/masters-theses/lars-dalskov-mosgaard/ Thu, 03 Nov 2011 12:45:00 +0100 https://nbi.ku.dk/english/theses/masters-theses/louise-revsbech-winther/ Hydration and mobility of trehalose in aqueous solution Supervisor: Thomas Rainer Heimburg https://nbi.ku.dk/english/theses/masters-theses/louise-revsbech-winther/ Sat, 01 Oct 2011 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/rolf-justesen-pedersen/ Electrophysiological measurements of spontaneous action potentials in craysh nerve in relation to the... https://nbi.ku.dk/english/theses/masters-theses/rolf-justesen-pedersen/ Mon, 20 Dec 2010 12:45:00 +0100 https://nbi.ku.dk/english/theses/masters-theses/katrine-rude-laub/ Ion Channels With and Without the Presence of Proterins Supervisor: Thomas Rainer Heimburg https://nbi.ku.dk/english/theses/masters-theses/katrine-rude-laub/ Tue, 14 Dec 2010 12:45:00 +0100 https://nbi.ku.dk/english/theses/masters-theses/klaus-bruun-pedersen/ Pore theory in pure lipid membranes Supervisor: Thomas Rainer Heimburg https://nbi.ku.dk/english/theses/masters-theses/klaus-bruun-pedersen/ Wed, 03 Nov 2010 12:45:00 +0100 https://nbi.ku.dk/english/theses/masters-theses/morten-karlsen/ The Effect of Non-Ionic Surfactants on the Potentiometric Response of Ion Selective Electrodes Supervisor: Thomas... https://nbi.ku.dk/english/theses/masters-theses/morten-karlsen/ Tue, 09 Jun 2009 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/kaare-graesboell/ Influence of Anesthetics on the Nerve Membrane and the Nerve Pulse Supervisor: Thomas Rainer Heimburg... https://nbi.ku.dk/english/theses/masters-theses/kaare-graesboell/ Fri, 19 Dec 2008 12:45:00 +0100 https://nbi.ku.dk/english/theses/masters-theses/asger-toennesen/ Electric Gradient Field Applied to Lipid Monolayers Supervisor: Thomas Rainer Heimburg https://nbi.ku.dk/english/theses/masters-theses/asger-toennesen/ Fri, 19 Dec 2008 12:45:00 +0100 https://nbi.ku.dk/english/theses/masters-theses/katarzyna-wodzinska/ Pores in lipid membranes and the effect of anaesthetics Supervisor: Thomas Rainer Heimburg https://nbi.ku.dk/english/theses/masters-theses/katarzyna-wodzinska/ Thu, 19 Jun 2008 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/marie-lundgaard-gudmundsson/ Phase behaviour in lipid tethers and vesicles - a thermodynamic study Supervisor: Thomas Rainer... https://nbi.ku.dk/english/theses/masters-theses/marie-lundgaard-gudmundsson/ Fri, 17 Aug 2007 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/andreas-blicher/ Permeability studies of lipid vesicles by Fluorescence Correlation Spectroscopy and Monte Carlo simulations... https://nbi.ku.dk/english/theses/masters-theses/andreas-blicher/ Thu, 02 Aug 2007 12:45:00 +0200 https://nbi.ku.dk/english/theses/masters-theses/marie-domange-jordo/ The temperature dependence of the elasticity of giant lipid vesicles: An Optical Tweezers, Callorimetry... https://nbi.ku.dk/english/theses/masters-theses/marie-domange-jordo/ Sat, 17 Feb 2007 12:45:00 +0100