Namiko Mitarai
Associate Professor
Biocomplexity
Blegdamsvej 17
2100 København Ø
- Published
Protein Localization with Flexible DNA or RNA
Bernhardsson, P. J. S., Mitarai, Namiko & Sneppen, Kim, 10 Feb 2012, In: PLoS.ONE.. 7, 2, p. e29218Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Disturbance accelerates the transition from low- to high-diversity state in a model ecosystem
Botta, F. & Mitarai, Namiko, 4 Feb 2014, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 89, 2, 022704.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Broad distribution of stick-slip events in slowly sheared granular media: Table-top production of a Gutenberg-Richter-like distribution
Bretz, M., Zaretzki, R., Field, S., Mitarai, Namiko & Nori, F., 2 Jun 2006, In: EPL. 74, 6, p. 1116-1122Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Protection of bacteriophage-sensitive Escherichia coli by lysogens
Brown, Stanley, Mitarai, Namiko & Sneppen, Kim, 2 Apr 2022, In: Proceedings of the National Academy of Sciences USA (PNAS). 119, 4, e2106005119.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Conditional Cooperativity of Toxin - Antitoxin Regulation Can Mediate Bistability between Growth and Dormancy
Cataudella, I., Sneppen, Kim, Gerdes, K. & Mitarai, Namiko, 1 Aug 2013, In: PLoS Computational Biology. 9, 8, e1003174.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Conditional Cooperativity in Toxin-Antitoxin Regulation Prevents Random Toxin Activation and Promotes Fast Translational Recovery
Cataudella, I., Trusina, Ala, Sneppen, Kim, Gerdes, K. & Mitarai, Namiko, 11 Apr 2012, In: Nucleic Acids Research. 40, 14, p. 6424-6434Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Motility mediates satellite formation in confined biofilms
Cordero, Mireia, Mitarai, Namiko & Jauffred, Liselotte, 17 Aug 2023, In: ISME Journal. 17, p. 1819-1827 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Information spreading and development of cultural centers
Dybiec, B. M., Mitarai, Namiko & Sneppen, Kim, 18 May 2012, In: Physical Review E. Statistical, Nonlinear, and Soft Matter Physics. 85, 5, p. 056116 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Axelrod model: accepting or discussing
Dybiec, B. M., Mitarai, Namiko & Sneppen, Kim, 1 Oct 2012, In: European Physical Journal B. Condensed Matter and Complex Systems. 85, 10, p. 357Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Modeling rises and falls in money addicted social hierarchies
Dybiec, B., Mitarai, Namiko & Sneppen, Kim, 2014, In: Physica Scripta. 89, 8, 085002.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Occlusion of the ribosome binding site connects the translational initiation frequency, mRNA stability and premature transcription termination
Eriksen, M., Sneppen, Kim, Pedersen, Steen & Mitarai, Namiko, 14 Mar 2017, In: Frontiers in Microbiology. 8, 7 p., 362.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A growing microcolony can survive and support persistent propagation of virulent phages
Eriksen, R. S., Svenningsen, Sine Lo, Sneppen, Kim & Mitarai, Namiko, 1 Jan 2018, In: Proceedings of the National Academy of Sciences USA (PNAS). 115, 2, p. 337-342Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The dynamics of phage predation on a microcolony
Eriksen, R. S., Larsen, Frej Andreas Nøhr, Svenningsen, Sine Lo, Sneppen, Kim & Mitarai, Namiko, 2024, In: Biophysical Journal. 123, 2, p. 147-156 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sustainability of spatially distributed bacteria-phage systems
Eriksen, R. S., Mitarai, Namiko & Sneppen, Kim, 2020, In: Scientific Reports. 10, 1, p. 1-12 3154.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
On Phage Adsorption to Bacterial Chains
Eriksen, R. S., Mitarai, Namiko & Sneppen, Kim, 3 Nov 2020, In: Biophysical Journal. 119, 9, p. 1896-1904 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Deterministic extinction by mixing in cyclically competing species
Feldager, C. W., Mitarai, Namiko & Ohta, H., 20 Mar 2017, In: Physical Review E. 95, 3, 032318.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Valine-Induced Isoleucine Starvation in Escherichia coli K-12 Studied by Spike-In Normalized RNA Sequencing
Gummesson, Bertil, Shah, S. A., Borum, A. S., Fessler, M., Mitarai, Namiko, Sørensen, Michael Askvad & Svenningsen, Sine Lo, 2020, In: Frontiers in Genetics. 11, 17 p., 144.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Theory of invasion extinction dynamics in minimal food webs
Härter, Jan Olaf Mirko, Mitarai, Namiko & Sneppen, Kim, 12 Feb 2018, In: Physical Review E. 97, 2, 10 p., 022404.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Existence and construction of large stable food webs
Härter, Jan Olaf Mirko, Mitarai, Namiko & Sneppen, Kim, 8 Sep 2017, In: Physical Review E. 96, 3, 032406.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Toxins, Targets, and Triggers: An Overview of Toxin-Antitoxin Biology
Harms, A., Brodersen, D. E., Mitarai, Namiko & Gerdes, K., 7 Jun 2018, In: Molecular Cell. 70, 5, p. 768-784 17 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Distinct Survival, Growth Lag, and rRNA Degradation Kinetics during Long-Term Starvation for Carbon or Phosphate
Himeoka, Y., Gummesson, Bertil, Sørensen, Michael Askvad, Svenningsen, Sine Lo & Mitarai, Namiko, 20 Apr 2022, In: mSphere. 7, 3, 12 p., e01006-21.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Modeling slow-processing of toxin messenger RNAs in type-I toxin-antitoxin systems: post-segregational killing and noise filtering
Himeoka, Y. & Mitarai, Namiko, Mar 2019, In: Physical Biology. 16, 2, 026001.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Emergence of growth and dormancy from a kinetic model of the Escherichia coli central carbon metabolism
Himeoka, Y. & Mitarai, Namiko, 30 Dec 2022, In: Physical Review Research. 4, 4, 23 p., 043223.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
When to wake up? The optimal waking-up strategies for starvation-induced persistence
Himeoka, Y. & Mitarai, Namiko, 11 Feb 2021, In: PLoS Computational Biology. 17, 2, 21 p., 1008655.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Dynamics of bacterial populations under the feast-famine cycles
Himeoka, Y. & Mitarai, Namiko, 27 Mar 2020, In: Physical Review Research. 2, 1, 15 p., 013372.Research output: Contribution to journal › Journal article › Research › peer-review
ID: 12071632
Most downloads
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1911
downloads
The functional half-life of an mRNA depends on the ribosome spacing in an early coding region
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
1473
downloads
Conditional Cooperativity of Toxin - Antitoxin Regulation Can Mediate Bistability between Growth and Dormancy
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
840
downloads
Speciation, diversification, and coexistence of sessile species that compete for space
Research output: Contribution to journal › Journal article › Research › peer-review
Published