Kim Sneppen
Professor
Biocomplexity
Blegdamsvej 17
2100 København Ø
- 2007
- Published
Frustration driven stock market dynamics: Leverage effect and asymmetry
Heden Ahlgren, P. T., Jensen, Mogens Høgh, Simonsen, I., Donangelo, R. & Sneppen, Kim, 2007, In: Physica A: Statistical Mechanics and its Applications. 383, 1, p. 1-4 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Modeling the two-hybrid detector: Experimental bias on protien interaction networks
Stibius, K. & Sneppen, Kim, 2007, In: Biophysical Journal. 93, 7, p. 2562-2566Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Modelling transcriptional interference and DNA looping in gene regulation
Dodd, I. B., Shearwin, K. & Sneppen, Kim, 2007, In: Journal of Molecular Biology. 369, 5, p. 1200-1213Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Networks and our limited information horizon
Rosvall, M. & Sneppen, Kim, 2007, In: International Journal of Bifurcation and Chaos in Applied Sciences and Engineering. 17, 7, p. 2509-2515Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Signal integration in the galactose network of Escherichia coli
Semsey, S., Krishna, S., Sneppen, Kim & Adhya, S., 2007, In: Molecular Microbiology. 65, 2, p. 465-476Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Spreading out of perturbations in reversible reaction networks
Maslov, S., Sneppen, Kim & Ispolatov, I., 2007, In: New Journal of Physics. 9, 273Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Theoretical analysis of epigenetic cell memory by nucleosome modification
Dodd, I. B., Micheelsen, M. A., Sneppen, Kim & Thon, Genevieve, 2007, In: Cell. 129, 4, p. 813-22 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
UV-induced mutagenesis in Escherichia coli SOS response: A quantitative model
Krishna, S., Maslov, S. & Sneppen, Kim, 2007, In: PLoS Computational Biology. 3, 3, p. 451-462Research output: Contribution to journal › Journal article › Research › peer-review
- 2006
- Published
Degree landscapes in scale-free networks
Axelsen, J. B., Bernhardsson, S., Rosvall, M., Sneppen, Kim & Trusina, Ala, Sep 2006, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 74, 3Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A communication perspective on network topologies
Sneppen, Kim & Rosvall, M., 2006, In: Progress of Theoretical Physics. Supplement. p. 103-118Research output: Contribution to journal › Conference article › Research › peer-review
- Published
Functional alignment of regulatory networks: a study of temperate phages
Trusina, Ala, Sneppen, Kim, Dodd, I. B., Shearwin, K. E. & Egan, J. B., 2006, In: PLoS Computational Biology. 1, 7, p. 599-603Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genetic regulation of fluxes: iron homeostasis escherichia coli
Semsey, S., Andersson, A. M. C., Krishna, S., Jensen, Mogens Høgh, Massé, E. & Sneppen, Kim, 2006, In: Nucleic Acids Research. 34, 17, p. 4960-4967Research output: Contribution to journal › Journal article › Research › peer-review
Genetic regulation of fluxes: iron homeostasis of Escherichia coli
Semsey, S., Andersson, A. M. C., Krishna, S., Jensen, Mogens Høgh, Massé, E. & Sneppen, Kim, 2006, In: Nucleic Acids Research. 34, 17, p. 4960-7 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Longevity of orders in related to the longevity of their constituent genera rather then genus richness
Bornholdt, S., Sneppen, Kim & Westphal, H., 2006, In: Theory in Biosciences. 128, 2, p. 75-83 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Minimal model of spiky oscillations in NF-kB signaling
Krishna, S., Jensen, Mogens Høgh & Sneppen, Kim, 2006, In: Proceedings of the National Academy of Science of the United States of America. 103, 4, p. 10840-10845Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Modeling self-organization of communication and topology in social networks
Rosvall, M. & Sneppen, Kim, 2006, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 74, 1, p. 016108Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Network models of phage-bacteria coevolution
Rosvall, M., Dodd, I. B., Krishna, S. & Sneppen, Kim, 2006, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 74, 6, p. 066105Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Self-assembly of information in networks
Rosvall, M. & Sneppen, Kim, 2006, In: EPL. 74, 6, p. 1109-1115Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Structure and communication in complex networks
Sneppen, Kim, 2006, In: NATO Science Series : Sub Series III, Computer and sytems sciences. p. 1-28Research output: Contribution to journal › Conference article › Research › peer-review
- Published
Structure and function of negative feedback loops at the interface of genetic and metabolic networks
Krishna, S., Andersson, A. M. C., Semsey, S. & Sneppen, Kim, 2006, In: Nucleic Acids Research. 34, 8, p. 2455-2462Research output: Contribution to journal › Journal article › Research › peer-review
Structure and function of negative feedback loops at the interface of genetic and metabolic networks
Krishna, S., Andersson, A. M. C., Semsey, S. & Sneppen, Kim, 2006, In: Nucleic Acids Research. 34, 8, p. 2455-62 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Synchronization model for stock market asymmetry
Donangelo, R., Jensen, Mogens Høgh, Simonsen, I. & Sneppen, Kim, 2006, In: Journal of Statistical Mechanics: Theory and Experiment. L11001, p. 1-8Research output: Contribution to journal › Journal article › Research › peer-review
- 2005
- Published
Measuring information networks
Sneppen, Kim, Trusina, Ala & Rosvall, M., Jun 2005, In: Pramana – Journal of Physics. 64, 6, p. 1121-1125Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Hide-and-seek on complex networks
Sneppen, Kim, Trusina, Ala & Rosvall, M., Mar 2005, In: EPL. 69, 5, p. 853-859Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A Mathematical Model for Transcriptional Interfernce by RNA Polymerase Traffic in Escherichia coli
Sneppen, Kim, Dodd, J., Shearwin, K., Palmer, A., Schubert, R., Callen, B. & Egan, B., 2005, In: Journal of Molecular Biology. 346, 2, p. 399-409Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Communication boundaries in networks
Sneppen, Kim, Rosvall, M. & Trussina, A., 2005, In: Physical Review Letters. 94, 23, p. 238701Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Computational architecture of the yeast regulatory network: Workshop on Flexibility in Biomolecules, MAY 15-18, 2005 Tempe, AZ
Maslov, S. & Sneppen, Kim, 2005, In: Physical Biology. 2, 4, Sp. iss. Sl, p. S94-S100Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Navigating netwoks with limited information
Rosvall, M., Minnhagen, P. & Sneppen, Kim, 2005, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 71, 6, p. 066111Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Need, greed and noise: competing strategies and in a trading model
Donangelo, R., Hansen, A., Sneppen, Kim & Souza, S. R., 2005, In: Physica A: Statistical Mechanics and its Applications. 348, p. 496-504Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Networks and Cities: An Information Perspective
Rosvall, M., Trusina, Ala, Minnhagen, P. & Sneppen, Kim, 2005, In: Physical Review Letters. 94, 2, 028701.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Oscillating gene expressions in regulatory network: Forces, Growth and Form in Soft Condensed Matter: At the Interface between Physics and Biology
Jensen, Mogens Høgh, Sneppen, Kim & Tiana, G., 2005, In: NATO Science Series : Sub-Series II, Mathematics, Physics and Chemistry. 160, p. 195-202Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Physics in Molecular Biology
Sneppen, Kim & Zocchi, G., 2005, UK: Cambridge University Press. 319 p.Research output: Book/Report › Book › Research
- Published
Searchability of networks
Rosvall, M., Grönlund, A., Minnhagen, P. & Sneppen, Kim, 2005, In: Physical Review E (Statistical, Nonlinear, and Soft Matter Physics). 72, p. 046117Research output: Contribution to journal › Journal article › Research
- Published
Self organized scale-free networks from merging and regeneration
Kim, B. J., Trusina, A., Minnhagen, P. & Sneppen, Kim, 2005, In: The European Physical Journal E: Soft Matter and Biological Physics. 43, 3, p. 369-372Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Spiky oscillations in NF-KB signalling
Krishna, S., Jensen, Mogens Høgh & Sneppen, Kim, 2005, In: Proceedings of the National Academy of Science of the United States of America. 103, p. 10840-10845Research output: Contribution to journal › Journal article › Research › peer-review
- 2004
- Published
Quantifying the benefits of translation regulation in the unfolded protein response
Axelsen, J. B. & Sneppen, Kim, 1 Oct 2004, In: Physical Biology. 1, 3, p. 159-165 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Self-organization of structures and networks from merging and small-scale fluctuations
Minnhagen, P., Rosvall, M., Sneppen, Kim & Trusina, Ala, 15 Sep 2004, In: Physica A: Statistical Mechanics and its Applications. 340, 4, p. 725-732Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Hierarchy measures in complex networks
Trusina, Ala, Maslov, S., Minnhagen, P. & Sneppen, Kim, 30 Apr 2004, In: Physical Review Letters. 92, 17, 178702.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A simple model for self organization of bipartite networks
Sneppen, Kim, Rosvall, M., Trusina, A. & Minnhagen, P., 2004, In: EPL. 67, 3, p. 349-354Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Detection in complex networks: correlation profile of the internet
Sneppen, Kim, Maslov, S. & Zalizynak, A., 2004, In: Physica A: Statistical Mechanics and its Applications. 333, p. 529-540Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Diffusion on complex networks: a way to probe their large-scale topological structures
Sneppen, Kim, Simonsen, I. & Eriksen, K., 2004, In: Physica A: Statistical Mechanics and its Applications. 336, p. 163-173Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Hierarchy and anti-hierarchy in real and scale free networks
Sneppen, Kim & Minnhagen, P., 2004, In: Physical Review Letters. 92, p. 178702Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Robustness of the Right Operator in Bacteriophage µ
Metzler, R., Bakk, A. & Sneppen, Kim, 2004, In: Biophysical Journal. 86, p. 58-66Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Scaling in fracture and refreezing of sea ice
Sneppen, Kim & Hansen, A. G., 2004, In: Physica A: Statistical Mechanics and its Applications. 331, p. 291-296Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sensitivity of phage µ upon variations of the gibbs free energy
Bakk, A., Sneppen, Kim & Metzler, R., 2004, In: Israel Journal of Chemistry. 44, p. 309-315Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Upstream plasticity and downstream robustness in evolution of molecular networks
Maslov, S., Sneppen, Kim, Astrup Eriksen, K. & Yan, K., 2004, In: BMC Evolutionary Biology. 4, p. 9-Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Variability alignment identifies functional regions in tubulin paralogs
Sneppen, Kim, 2004, In: Protein Science. 13, p. 25-31Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Visualization of large-scale correlations in gene expressions
Eriksen, K., Hörnquist, M. & Sneppen, Kim, 2004, In: Functional & Integrative Genomics. 4, 4, p. 241-245Research output: Contribution to journal › Journal article › Research › peer-review
- 2003
- Published
Competition between diffusion and fragmentation: an important evolutionary process of nature
Borg, J., Jensen, Mogens Høgh, Mathiesen, J. K., Olesen, Poul & Sneppen, Kim, 2003, In: Physical Review Letters. 91, p. 266103Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Single-cell Analysis of Lambda Immunity Regulation
Bæk, K. T., Svenningsen, Sine Lo, Eisen, H., Sneppen, Kim & Brown, Stanley, 2003, In: Journal of Molecular Biology. 334, 3, p. 363-372 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
ID: 10093
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Direct and indirect effects in the regulation of overlapping promoters
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Single-cell Analysis of Lambda Immunity Regulation
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The functional half-life of an mRNA depends on the ribosome spacing in an early coding region
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